Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TOMM40 ENSSSCG00000003089

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Description

translocase of outer mitochondrial membrane 40 [Source:VGNC Symbol;Acc:VGNC:94305]

Location

Primary_assembly 6: 51,359,595-51,369,908 forward strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 6 transcripts (splice variants), 251 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000066976.2	TOMM40-204	1871	400aa	ENSSSCP00000065686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QLH6 A0A8D0YFQ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000087187.1	TOMM40-202	2248	372aa	ENSSSCP00000064489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QKH8 A0A8D2AAE9	-
ENSSSCT00000104745.1	TOMM40-201	2205	360aa	ENSSSCP00000079123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FJP6	-
ENSSSCT00000088275.2	TOMM40-205	1748	359aa	ENSSSCP00000065526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QU51	-
ENSSSCT00000026472.3	TOMM40-203	1734	361aa	ENSSSCP00000025532.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1K2F8 D0V557	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000003427.5	TOMM40-206	1441	323aa	ENSSSCP00000003344.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RM44	-

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Summary

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