Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TM6SF1 ENSSSCG00000001800

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Description

transmembrane 6 superfamily member 1 [Source:VGNC Symbol;Acc:VGNC:94034]

Location

Primary_assembly 7: 51,815,530-51,845,163 reverse strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 4 transcripts (splice variants), 197 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000053739.2	TM6SF1-203	2189	370aa	ENSSSCP00000053571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BAJ7 A0A4X1ULT7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000045143.2	TM6SF1-204	2096	339aa	ENSSSCP00000053456.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BBG4 A0A4X1ULV2	-
ENSSSCT00000051337.2	TM6SF1-202	1071	254aa	ENSSSCP00000050903.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B482 A0A8D1RBE6	-
ENSSSCT00000080658.1	TM6SF1-201	720	188aa	ENSSSCP00000059785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1ULV9 A0A5G2Q7J5	-

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Summary

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