Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RLIG1 ENSSSCG00000000925

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Description

RNA 5'-phosphate and 3'-OH ligase 1 [Source:VGNC Symbol;Acc:VGNC:86040]

Location

Primary_assembly 5: 94,473,174-94,489,661 reverse strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 2 transcripts (splice variants) and 205 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000001010.5	RLIG1-202	3164	325aa	ENSSSCP00000000988.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UZP9 F1SPZ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000046326.3	RLIG1-201	3280	301aa	ENSSSCP00000032567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZM78 A0A4X1UZQ3	-

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Summary

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