Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TTLL1 ENSSSCG00000000035

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Description

TTL family tubulin polyglutamylase complex subunit L1 [Source:VGNC Symbol;Acc:VGNC:94566]

Location

Primary_assembly 5: 5,793,780-5,827,633 forward strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 5 transcripts (splice variants), 205 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000053033.3	TTLL1-201	1708	447aa	ENSSSCP00000033261.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZNR0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000000037.5	TTLL1-205	1817	441aa	ENSSSCP00000000037.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SJR6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000072800.1	TTLL1-202	1778	406aa	ENSSSCP00000059924.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2Q790 A0A8D1M069	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000066398.3	TTLL1-203	1658	394aa	ENSSSCP00000057128.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BKK3 A0A4X1W5J3	-
ENSSSCT00000078160.2	TTLL1-204	1470	357aa	ENSSSCP00000069818.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QY59	-

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Summary

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