Transcript: ENSRNOT00000081167.2 Slc5a6-201

Description

solute carrier family 5 member 6 [Source:RGD Symbol;Acc:69648]

Gene Synonyms

SMVT

Location

About this transcript

This transcript has 17 exons, is annotated with 23 domains and features, is associated with 58 variant alleles and maps to 216 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000082623.2	Slc5a6-202	3064	634aa	ENSRNOP00000075361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4F760 O70247	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000081167.2	Slc5a6-201	2918	607aa	ENSRNOP00000071291.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2R3T7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 17, Coding exons: 15, Transcript length: 2,918 bps, Translation length: 607 residues

Version

ENSRNOT00000081167.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.