Transcript: ENSRNOT00000071306.3 Lrriq1-201

Description

leucine-rich repeats and IQ motif containing 1 [Source:RGD Symbol;Acc:1564903]

Gene Synonyms

LOC299759, RGD1564903

Location

About this transcript

This transcript has 26 exons, is annotated with 47 domains and features, is associated with 708 variant alleles and maps to 225 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000111314.1	Lrriq1-202	6707	1701aa	ENSRNOP00000077587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZJI9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000071306.3	Lrriq1-201	5549	1607aa	ENSRNOP00000067860.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0RDZ6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 26, Coding exons: 24, Transcript length: 5,549 bps, Translation length: 1,607 residues

Version

ENSRNOT00000071306.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.