Transcript: ENSRNOT00000068098.4 Snx12-201

Description

sorting nexin 12 [Source:RGD Symbol;Acc:1565585]

Gene Synonyms

LOC363478, RGD1565585

Location

Primary_assembly X: 66,341,396-66,356,950 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 8 variant alleles and maps to 85 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000004036.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000076403.2	Snx12-202	2318	182aa	ENSRNOP00000068481.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MKE2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000068098.4	Snx12-201	1073	170aa	ENSRNOP00000061412.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A719	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000076635.3	Snx12-203	1005	166aa	ENSRNOP00000068200.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MJN6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,073 bps, Translation length: 170 residues

Version

ENSRNOT00000068098.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000068098.4 Snx12-201

Summary

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Transcript: ENSRNOT00000068098.4 Snx12-201

Summary

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