Transcript: ENSRNOT00000067875.5 Spp1-201

Description

secreted phosphoprotein 1 [Source:RGD Symbol;Acc:3752]

Gene Synonyms

LOC100359743, OSP, SPP-1

Location

About this transcript

This transcript has 7 exons, is annotated with 25 domains and features, is associated with 215 variant alleles and maps to 160 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000067875.5	Spp1-201	1529	317aa	ENSRNOP00000062358.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P08721	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000075989.2	Spp1-202	1498	316aa	ENSRNOP00000068511.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QZH3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,529 bps, Translation length: 317 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P08721

Version

ENSRNOT00000067875.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.