Transcript: ENSRNOT00000063878.3 Ccdc188-201

Description

coiled-coil domain containing 188 [Source:RGD Symbol;Acc:1563782]

Gene Synonyms

LOC498115, RGD1563782

Location

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 48 variant alleles and maps to 102 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000063878.3	Ccdc188-201	2324	423aa	ENSRNOP00000062777.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8J8YII4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000097483.1	Ccdc188-202	2354	402aa	ENSRNOP00000092016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGR1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,324 bps, Translation length: 423 residues

Version

ENSRNOT00000063878.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.