Transcript: ENSRNOT00000059564.5 C17h6orf62-ps1-201

Description

similar to human chromosome 6 open reading frame 62, pseudogene 1 [Source:RGD Symbol;Acc:1588449]

Gene Synonyms

LOC498750

Location

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 83 variant alleles and maps to 238 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000083996.2	C17h6orf62-ps1-202	734	229aa	ENSRNOP00000072694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7TP28	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000059564.5	C17h6orf62-ps1-201	3464	228aa	ENSRNOP00000056321.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7ELW2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,464 bps, Translation length: 228 residues

Version

ENSRNOT00000059564.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.