Transcript: ENSRNOT00000040548.3 Scfd1-201

Description

sec1 family domain containing 1 [Source:RGD Symbol;Acc:619828]

Gene Synonyms

RA410, Sly1, rSly1, sly1p

Location

About this transcript

This transcript has 25 exons, is annotated with 11 domains and features, is associated with 288 variant alleles and maps to 228 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000040548.3	Scfd1-201	2098	637aa	ENSRNOP00000039132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q62991	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000110902.1	Scfd1-204	2151	628aa	ENSRNOP00000092379.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGF5	-
ENSRNOT00000108338.1	Scfd1-203	2072	574aa	ENSRNOP00000077399.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y1I7	-
ENSRNOT00000107693.1	Scfd1-202	1851	584aa	ENSRNOP00000082071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G6Y5	-
ENSRNOT00000120031.1	Scfd1-205	1187	389aa	ENSRNOP00000088329.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A9S9	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 2,098 bps, Translation length: 637 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q62991

Version

ENSRNOT00000040548.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.