Transcript: ENSRNOT00000014926.7 Hmgcll1-201

Description

3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1 [Source:RGD Symbol;Acc:1565090]

Gene Synonyms

LOC367112, RGD1565090

Location

About this transcript

This transcript has 9 exons, is annotated with 7 domains and features, is associated with 401 variant alleles and maps to 121 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000014926.7	Hmgcll1-201	3162	343aa	ENSRNOP00000014927.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A5C3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000117160.1	Hmgcll1-204	3066	311aa	ENSRNOP00000081589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZVC0	-
ENSRNOT00000105236.1	Hmgcll1-202	2853	240aa	ENSRNOP00000080571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZQC1	-
ENSRNOT00000111830.1	Hmgcll1-203	2664	177aa	ENSRNOP00000091852.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGX3	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 3,162 bps, Translation length: 343 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: D4A5C3

Version

ENSRNOT00000014926.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.