Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Gabpa ENSRNOG00000053205

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Description

GA binding protein transcription factor subunit alpha [Source:RGD Symbol;Acc:1310802]

Gene Synonyms

Nrf-2alpha, Nrf2a

Location

Primary_assembly 11: 37,375,084-37,404,059 forward strand.

GRCr8:CM070401.1

About this gene

This gene has 3 transcripts (splice variants), 215 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000086946.3	Gabpa-201	2475	456aa	ENSRNOP00000071293.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4ACQ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000125355.1	Gabpa-203	4106	454aa	ENSRNOP00000099854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JL60	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000103216.2	Gabpa-202	3866	443aa	ENSRNOP00000097612.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GML2	-

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Summary

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