Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
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External references
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ID History
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Gene: LOC120093089 ENSRNOG00000043249

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Description

putative protein TPRXL [Source:RGD Symbol;Acc:41373121]

Gene Synonyms

Dpde1, MGC188426

Location

Primary_assembly 16: 18,711,703-18,715,496 reverse strand.

mRatBN7.2:CM026989.1

About this gene

This gene has 4 transcripts (splice variants) and 38 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000114545.1	LOC120093089-203	1354	235aa	ENSRNOP00000091339.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AFX8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000114874.1	LOC120093089-204	1237	222aa	ENSRNOP00000079655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZNT7	-
ENSRNOT00000066168.2	LOC120093089-201	1181	204aa	ENSRNOP00000061615.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7FIG6	-
ENSRNOT00000097187.1	LOC120093089-202	943	98aa	ENSRNOP00000085862.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A4J3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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