Gene: Lcor ENSRNOG00000042679

Description

ligand dependent nuclear receptor corepressor [Source:RGD Symbol;Acc:1311704]

Gene Synonyms

LOC100911430, LOC365462, RGD1311704

Location

Primary_assembly 1: 250,247,934-250,354,985 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 4 transcripts (splice variants), 164 orthologues, 1 paralogue and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000114892.2	Lcor-203	15170	1838aa	ENSRNOP00000076484.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y016	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000076842.4	Lcor-201	5006	593aa	ENSRNOP00000068372.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MK42	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000144002.1	Lcor-204	4575	491aa	ENSRNOP00000106558.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000114870.2	Lcor-202	4566	433aa	ENSRNOP00000076922.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y0Y8 A6JH78	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Gene: Lcor ENSRNOG00000042679

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Gene: Lcor ENSRNOG00000042679

Summary

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