Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Cln6 ENSRNOG00000007164

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Description

CLN6, transmembrane ER protein [Source:RGD Symbol;Acc:1309714]

Gene Synonyms

LOC315746

Location

Primary_assembly 8: 72,198,712-72,213,776 forward strand.

GRCr8:CM070398.1

About this gene

This gene has 2 transcripts (splice variants), 191 orthologues and is associated with 19 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000034926.8	Cln6-201	2075	318aa	ENSRNOP00000035915.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZZ46	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000078091.3	Cln6-202	2170	296aa	ENSRNOP00000073335.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K587	-

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Summary

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