Transcript: ENSPTRT00000105456.1 EGR3-201

Description

early growth response 3 [Source:VGNC Symbol;Acc:VGNC:11966]

Location

About this transcript

This transcript has 3 exons, is annotated with 22 domains and features and maps to 441 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000037189.4	EGR3-202	6120	387aa	ENSPTRP00000034368.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y1N9 H2QVV4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000105456.1	EGR3-201	5745	349aa	ENSPTRP00000070882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S1M3 A0A6D2X5W1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 5,745 bps, Translation length: 349 residues

Version

ENSPTRT00000105456.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.