Transcript: ENSPTRT00000098662.1 COL18A1-201

Description

collagen type XVIII alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:10689]

Location

About this transcript

This transcript has 42 exons, is annotated with 41 domains and features and maps to 779 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000046373.5	COL18A1-203	6664	1754aa	ENSPTRP00000053920.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2YAI0 H2RAH2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000098662.1	COL18A1-201	4020	1339aa	ENSPTRP00000092192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WR64 K7BUN1	-
ENSPTRT00000098620.1	COL18A1-202	3597	1198aa	ENSPTRP00000077825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SLI7	-

Summary

Statistics

Exons: 42, Coding exons: 42, Transcript length: 4,020 bps, Translation length: 1,339 residues

Version

ENSPTRT00000098662.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.