Transcript: ENSPTRT00000033939.6 COL12A1-202

Description

collagen type XII alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:10664]

Location

Chromosome 6: 77,817,426-77,939,046 reverse strand.

About this transcript

This transcript has 66 exons, is annotated with 154 domains and features and maps to 1639 oligo probes.

Gene

This transcript is a product of gene ENSPTRG00000018351.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000033939.6	COL12A1-202	11728	3063aa	ENSPTRP00000031362.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WYC7 H2QTA4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000101493.1	COL12A1-204	8964	2987aa	ENSPTRP00000083314.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T372 A0A6D2XSQ6	-
ENSPTRT00000079105.1	COL12A1-206	8883	2960aa	ENSPTRP00000070795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S1D4	-
ENSPTRT00000105778.1	COL12A1-201	8092	1899aa	ENSPTRP00000080025.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XVP5 K7BGW3	-
ENSPTRT00000086817.1	COL12A1-203	5625	1874aa	ENSPTRP00000082612.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T098 A0A6D2WZQ0	-
ENSPTRT00000110293.1	COL12A1-205	5424	1807aa	ENSPTRP00000063128.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3REQ7	-

Summary

Statistics

Exons: 66, Coding exons: 65, Transcript length: 11,728 bps, Translation length: 3,063 residues

Version

ENSPTRT00000033939.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSPTRT00000033939.6 COL12A1-202

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Transcript: ENSPTRT00000033939.6 COL12A1-202

Summary

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