Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CTSB ENSPTRG00000019998

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Description

cathepsin B [Source:VGNC Symbol;Acc:VGNC:897]

Location

Chromosome 8: 11,244,085-11,267,670 reverse strand.

Pan_tro_3.0:CM000322.4

About this gene

This gene has 3 transcripts (splice variants), 222 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000037056.5	CTSB-202	2279	339aa	ENSPTRP00000034241.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QVR7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000094399.1	CTSB-201	1570	339aa	ENSPTRP00000078053.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QVR7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000108193.1	CTSB-203	612	203aa	ENSPTRP00000063562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RFZ9	-

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Summary

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