Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
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Genetic Variation
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- Structural variants
Gene expression
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ID History
- Gene history

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Gene: SOD2 ENSPTRG00000018757

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Description

superoxide dismutase 2 [Source:VGNC Symbol;Acc:VGNC:52105]

Location

Chromosome 6: 163,988,643-164,002,527 reverse strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 4 transcripts (splice variants) and 202 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000101651.1	SOD2-202	717	238aa	ENSPTRP00000083441.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T2J1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000046878.3	SOD2-201	705	234aa	ENSPTRP00000042459.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R1J3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000085337.1	SOD2-203	552	183aa	ENSPTRP00000075583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8KK83 A0A6D2X977	-
ENSPTRT00000082400.1	SOD2-204	489	162aa	ENSPTRP00000084218.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T4R1 A0A6D2WWS0	-

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Summary

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