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Gene: NFYA ENSPTRG00000018146

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Description

nuclear transcription factor Y subunit alpha [Source:VGNC Symbol;Acc:VGNC:3588]

Location

Chromosome 6: 41,543,173-41,570,168 forward strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 3 transcripts (splice variants) and 236 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000089969.1	NFYA-202	4245	347aa	ENSPTRP00000081753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SXN5 A0A6D2Y4U7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000099305.1	NFYA-203	3983	318aa	ENSPTRP00000084597.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WA97 K7DH96	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000033550.5	NFYA-201	3752	341aa	ENSPTRP00000031003.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QSY8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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