Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIM36 ENSPTRG00000017145

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Description

tripartite motif containing 36 [Source:VGNC Symbol;Acc:VGNC:4209]

Location

Chromosome 5: 114,687,922-114,743,325 reverse strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 5 transcripts (splice variants), 207 orthologues and 87 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000031755.4	TRIM36-201	2849	728aa	ENSPTRP00000029340.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WMZ3 H2QRC2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000107954.1	TRIM36-202	2578	716aa	ENSPTRP00000071359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S352 A0A6D2X140	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000077287.1	TRIM36-203	1554	517aa	ENSPTRP00000064067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RHF4	-
ENSPTRT00000106081.1	TRIM36-204	962	60aa	ENSPTRP00000071322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S3B3 A0A6D2X3M8	-
ENSPTRT00000096922.1	TRIM36-205	186	62aa	ENSPTRP00000086244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TBJ2 A0A6D2W9U8	-

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Summary

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