Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SKP2 ENSPTRG00000016797

.

Description

S-phase kinase associated protein 2 [Source:VGNC Symbol;Acc:VGNC:14453]

Location

Chromosome 5: 78,135,987-78,168,005 reverse strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 4 transcripts (splice variants), 252 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000031184.5	SKP2-203	1278	425aa	ENSPTRP00000028804.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QQS0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000102948.1	SKP2-201	3554	424aa	ENSPTRP00000063321.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RFB4 A0A6D2WES0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000104255.1	SKP2-204	654	217aa	ENSPTRP00000064315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RIX1 A0A6D2Y8Q1	-
ENSPTRT00000076415.1	SKP2-202	633	210aa	ENSPTRP00000090490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TNI2 A0A6D2WWR4	-

.

Summary

.

.