Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: ARFIP1 ENSPTRG00000016519

.

Description

ADP ribosylation factor interacting protein 1 [Source:VGNC Symbol;Acc:VGNC:2946]

Location

Chromosome 4: 156,607,327-156,739,215 forward strand.

Pan_tro_3.0:CM000318.3

About this gene

This gene has 3 transcripts (splice variants), 259 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000030708.3	ARFIP1-201	3181	373aa	ENSPTRP00000028360.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VVR2 H2QQA4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000110959.1	ARFIP1-202	3085	341aa	ENSPTRP00000073987.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WTC9 K7AE20	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000109680.1	ARFIP1-203	582	193aa	ENSPTRP00000072829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S712 A0A6D2X3C5	-

.

Summary

.

.