Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ALPK1 ENSPTRG00000016375

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Description

alpha kinase 1 [Source:VGNC Symbol;Acc:VGNC:2948]

Location

Chromosome 4: 115,413,099-115,477,833 forward strand.

Pan_tro_3.0:CM000318.3

About this gene

This gene has 3 transcripts (splice variants), 187 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000030459.6	ALPK1-202	5116	1244aa	ENSPTRP00000028125.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X5V0 H2QQ20	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000097390.1	ALPK1-203	3501	1166aa	ENSPTRP00000063890.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RGV1 A0A6D2Y598	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000101351.1	ALPK1-201	366	121aa	ENSPTRP00000068698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RVH9	-

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Summary

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