Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: TBC1D1 ENSPTRG00000015981

.

Description

TBC1 domain family member 1 [Source:VGNC Symbol;Acc:VGNC:2963]

Location

Chromosome 4: 38,282,528-38,523,438 forward strand.

Pan_tro_3.0:CM000318.3

About this gene

This gene has 5 transcripts (splice variants), 204 orthologues and 39 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000029816.4	TBC1D1-203	3507	1168aa	ENSPTRP00000027512.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QPC0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000105974.1	TBC1D1-204	3480	1159aa	ENSPTRP00000073038.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S7T3	-
ENSPTRT00000090611.1	TBC1D1-205	3204	1067aa	ENSPTRP00000069832.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RZU6	-
ENSPTRT00000099149.1	TBC1D1-201	471	156aa	ENSPTRP00000078621.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SQ23	-
ENSPTRT00000092339.1	TBC1D1-202	435	144aa	ENSPTRP00000093408.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TW51 A0A6D2VTL7	-

.

Summary

.

.