Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMTN ENSPTRG00000014259

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Description

smoothelin [Source:VGNC Symbol;Acc:VGNC:12926]

Location

Chromosome 22: 17,671,587-17,694,943 forward strand.

Pan_tro_3.0:CM000335.3

About this gene

This gene has 5 transcripts (splice variants) and 125 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000105172.1	SMTN-202	4585	1002aa	ENSPTRP00000077135.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SJE8 A0A6D2WWI0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000081102.1	SMTN-201	3316	915aa	ENSPTRP00000070368.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8QNW0 A0A6D2Y712	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000089176.1	SMTN-204	2916	971aa	ENSPTRP00000074705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SCD1 A0A6D2XES8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000026639.7	SMTN-203	2754	917aa	ENSPTRP00000024555.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QLI1	-
ENSPTRT00000088198.1	SMTN-205	1317	438aa	ENSPTRP00000071363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S2Z2 A0A6D2XQ47	-

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Summary

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