Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: MSH6 ENSPTRG00000011906

.

Description

mutS homolog 6 [Source:VGNC Symbol;Acc:VGNC:301]

Location

Chromosome 2A: 48,871,261-48,923,775 forward strand.

Pan_tro_3.0:CM000315.3

About this gene

This gene has 3 transcripts (splice variants), 201 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000022148.5	MSH6-201	4355	1360aa	ENSPTRP00000020434.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QHW0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000099629.1	MSH6-203	3690	1230aa	ENSPTRP00000070312.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S039	-
ENSPTRT00000085025.1	MSH6-202	315	104aa	ENSPTRP00000068952.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RWF4 A0A6D2Y5B6	-

.

Summary

.

.