Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: APOB ENSPTRG00000011699

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Description

apolipoprotein B [Source:VGNC Symbol;Acc:VGNC:171]

Location

Chromosome 2A: 21,371,172-21,413,720 reverse strand.

Pan_tro_3.0:CM000315.3

About this gene

This gene has 3 transcripts (splice variants) and 355 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000021790.4	APOB-201	14118	4562aa	ENSPTRP00000052150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R8Y5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000109070.1	APOB-202	13611	4536aa	ENSPTRP00000084904.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T6M8	-
ENSPTRT00000081113.1	APOB-203	2484	827aa	ENSPTRP00000086050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T9X1	-

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Summary

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