Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CLEC4M ENSPTRG00000010404

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Description

C-type lectin domain family 4 member M [Source:VGNC Symbol;Acc:VGNC:6620]

Location

Chromosome 19: 8,154,819-8,161,092 forward strand.

Pan_tro_3.0:CM000333.3

About this gene

This gene has 3 transcripts (splice variants), 908 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000062284.4	CLEC4M-201	1338	445aa	ENSPTRP00000054840.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8J6C6 Q8HYC0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000062312.3	CLEC4M-203	1191	396aa	ENSPTRP00000054867.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2RB17	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000062301.4	CLEC4M-202	999	332aa	ENSPTRP00000054856.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XB99 H2RB16	-

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Summary

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