Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PAPLN ENSPTRG00000006512

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Description

papilin, proteoglycan like sulfated glycoprotein [Source:VGNC Symbol;Acc:VGNC:8220]

Location

Chromosome 14: 57,769,049-57,806,854 forward strand.

Pan_tro_3.0:CM000328.3

About this gene

This gene has 3 transcripts (splice variants), 264 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000096790.1	PAPLN-201	6425	1278aa	ENSPTRP00000077637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SKU7 A0A6D2YAY7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000011939.6	PAPLN-202	6349	1251aa	ENSPTRP00000052575.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WCM4 H2R995	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000078621.1	PAPLN-203	2397	798aa	ENSPTRP00000083369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T2D6	-

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Summary

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