Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GRIA4 ENSPTRG00000004233

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Description

glutamate ionotropic receptor AMPA type subunit 4 [Source:VGNC Symbol;Acc:VGNC:11793]

Location

Chromosome 11: 105,833,603-106,216,788 forward strand.

Pan_tro_3.0:CM000325.3

About this gene

This gene has 4 transcripts (splice variants), 324 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000096900.1	GRIA4-202	2799	902aa	ENSPTRP00000083883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T3T7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000007896.4	GRIA4-204	2709	902aa	ENSPTRP00000007287.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XA70 C7G3L3	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000079789.1	GRIA4-201	2535	814aa	ENSPTRP00000079936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SSF3	-
ENSPTRT00000078536.1	GRIA4-203	1302	433aa	ENSPTRP00000085221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8LBV0 A0A6D2WUA9	-

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Summary

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