Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CLCN6 ENSPTRG00000000154

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Description

chloride voltage-gated channel 6 [Source:VGNC Symbol;Acc:VGNC:10576]

Location

Chromosome 1: 11,281,060-11,317,954 forward strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 7 transcripts (splice variants), 212 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000000345.6	CLCN6-203	2859	952aa	ENSPTRP00000000296.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2PY12	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000091107.1	CLCN6-201	5685	869aa	ENSPTRP00000082206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7CM04	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000077580.1	CLCN6-204	2580	859aa	ENSPTRP00000092925.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TUH4	-
ENSPTRT00000095461.1	CLCN6-205	2580	859aa	ENSPTRP00000069870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RZ30	-
ENSPTRT00000094999.1	CLCN6-206	2544	847aa	ENSPTRP00000065239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RKM6	-
ENSPTRT00000108643.1	CLCN6-207	909	302aa	ENSPTRP00000072342.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G2HFQ9	-
ENSPTRT00000108778.1	CLCN6-202	369	122aa	ENSPTRP00000076058.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SGB6 A0A6D2Y193	-

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Summary

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