Transcript: ENST00000360428.9 DSC3-201

Description

desmocollin 3 [Source:HGNC Symbol;Acc:HGNC:3037]

Gene Synonyms

CDHF3, DSC, DSC1, DSC2, DSC4

Location

Chromosome 18: 30,989,365-31,042,742 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 55 domains and features, is associated with 25350 variant alleles and maps to 757 oligo probes.

Gene

This transcript is a product of gene ENSG00000134762.17 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000360428.9	DSC3-201	7583	896aa	ENSP00000353608.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32810	Q14574-1	NM_001941.5	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000434452.5	DSC3-202	6978	839aa	ENSP00000392068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q14574-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000584980.1	DSC3-203	907	214aa	ENSP00000464283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRL9	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Transcript: ENST00000360428.9 DSC3-201

Protein summary

Protein domains for ENSP00000353608.4

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Transcript: ENST00000360428.9 DSC3-201

Protein summary

Protein domains for ENSP00000353608.4

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