Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: scn1laa ENSORLG00000016955

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Description

sodium channel, voltage-gated, type I-like, alpha [Source:ZFIN;Acc:ZDB-GENE-040426-751]

Location

Primary_assembly 21: 21,352,953-21,387,599 forward strand.

ASM223467v1:CP020685.1

About this gene

This gene has 10 transcripts (splice variants), 81 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSORLT00000046737.1	scn1laa-205	5922	1973aa	ENSORLP00000037311.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3I034	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSORLT00000031180.1	scn1laa-201	5862	1953aa	ENSORLP00000031533.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3HIH3	-
ENSORLT00000047083.1	scn1laa-206	5853	1950aa	ENSORLP00000027830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3H8H5	-
ENSORLT00000043679.1	scn1laa-207	5811	1936aa	ENSORLP00000037318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3HZR4	-
ENSORLT00000032172.1	scn1laa-208	5652	1883aa	ENSORLP00000025921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3H275	-
ENSORLT00000021211.2	scn1laa-202	5571	1856aa	ENSORLP00000021210.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2MR34	-
ENSORLT00000035153.1	scn1laa-203	5559	1852aa	ENSORLP00000033225.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3HN77	-
ENSORLT00000043775.1	scn1laa-209	5487	1828aa	ENSORLP00000029837.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3HDD1	-
ENSORLT00000037747.1	scn1laa-210	5457	1818aa	ENSORLP00000044120.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3IJ48	-
ENSORLT00000044829.1	scn1laa-204	5382	1793aa	ENSORLP00000041530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3ICA9	-

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Summary

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