Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: sox5 ENSONIG00000009878

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Description

SRY-box transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-000607-13]

Location

Primary_assembly LG17: 4,294,685-4,381,023 forward strand.

O_niloticus_UMD_NMBU:CM007498.2

About this gene

This gene has 7 transcripts (splice variants), 217 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSONIT00000069493.1	sox5-201	3153	787aa	ENSONIP00000033478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669BCN2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSONIT00000060503.1	sox5-202	3072	760aa	ENSONIP00000044598.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669C9X7	-
ENSONIT00000042098.1	sox5-203	2907	705aa	ENSONIP00000030717.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669B5P7	-
ENSONIT00000057509.1	sox5-204	2381	780aa	ENSONIP00000032729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669BE40	-
ENSONIT00000012423.2	sox5-205	2327	762aa	ENSONIP00000012414.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3JU69	-
ENSONIT00000012422.2	sox5-207	2273	744aa	ENSONIP00000012413.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3JU68	-
ENSONIT00000033620.1	sox5-206	1964	641aa	ENSONIP00000081158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669FC88	-

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Summary

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