Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PCDH1 ENSNLEG00000009682

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Description

protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655]

Location

Chromosome 2: 39,378,022-39,401,495 forward strand.

Nleu_3.0:CM001648.1

About this gene

This gene has 5 transcripts (splice variants), 271 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSNLET00000012361.2	PCDH1-205	3660	1219aa	ENSNLEP00000011781.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1REY1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSNLET00000033368.1	PCDH1-203	3078	1025aa	ENSNLEP00000033537.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3GQJ7	-
ENSNLET00000043058.1	PCDH1-204	3057	1018aa	ENSNLEP00000033382.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3GQ39	-
ENSNLET00000043212.1	PCDH1-201	1149	382aa	ENSNLEP00000028385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3GAS1	-
ENSNLET00000040520.1	PCDH1-202	1137	378aa	ENSNLEP00000041643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3HDB2	-

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Summary

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