Transcript: ENSMUST00000229755.2 Dennd6b-203

Description

DENN domain containing 6B [Source:MGI Symbol;Acc:MGI:1916690]

Gene Synonyms

1700027J05Rik, Fam116b

Location

Chromosome 15: 89,069,020-89,080,647 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 1 domain and feature, is associated with 977 variant alleles and maps to 285 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000015377.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000078953.9	Dennd6b-201	4585	585aa	ENSMUSP00000077978.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS57000	Q9D9V7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000229755.2	Dennd6b-203	2677	64aa	ENSMUSP00000155612.2	Nonsense mediated decay		A0A2R8VKJ9	-
ENSMUST00000229935.2	Dennd6b-204	5261	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000230823.2	Dennd6b-206	2028	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000229416.2	Dennd6b-202	1969	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000230111.2	Dennd6b-205	1904	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 18, Coding exons: 2, Transcript length: 2,677 bps, Translation length: 64 residues

Version

ENSMUST00000229755.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000229755.2 Dennd6b-203

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Transcript: ENSMUST00000229755.2 Dennd6b-203

Summary

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