Transcript: ENSMUST00000229628.2 Cyp2d10-202

Description

cytochrome P450, family 2, subfamily d, polypeptide 10 [Source:MGI Symbol;Acc:MGI:88602]

Gene Synonyms

Cyp2d, P450-2D

Location

Chromosome 15: 82,287,047-82,291,396 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 1 domain and feature, is associated with 897 variant alleles and maps to 271 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000094806.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000072776.5	Cyp2d10-201	1648	504aa	ENSMUSP00000072555.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27690	P24456	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000230198.2	Cyp2d10-204	1482	450aa	ENSMUSP00000155626.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VKK3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000229911.2	Cyp2d10-203	1141	335aa	ENSMUSP00000155800.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8W740	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000230843.2	Cyp2d10-206	847	282aa	ENSMUSP00000155572.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VHY1	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSMUST00000230248.2	Cyp2d10-205	447	130aa	ENSMUSP00000155651.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8W703	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000229628.2	Cyp2d10-202	1310	176aa	ENSMUSP00000155493.2	Nonsense mediated decay		A0A2R8W6W2	-

Summary

Statistics

Exons: 7, Coding exons: 4, Transcript length: 1,310 bps, Translation length: 176 residues

Version

ENSMUST00000229628.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript: ENSMUST00000229628.2 Cyp2d10-202

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Transcript: ENSMUST00000229628.2 Cyp2d10-202

Summary

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