Transcript: ENSMUST00000229494.2 Zfp251-202

Description

zinc finger protein 251 [Source:MGI Symbol;Acc:MGI:1918841]

Gene Synonyms

9130001M19Rik

Location

Chromosome 15: 76,737,210-76,755,617 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 74 domains and features, is associated with 2037 variant alleles and maps to 164 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022526.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000080406.7	Zfp251-201	4036	632aa	ENSMUSP00000079268.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27593	Q6PCX8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000229494.2	Zfp251-202	2855	622aa	ENSMUSP00000155649.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q3V362	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000230315.2	Zfp251-203	3337	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000230524.2	Zfp251-204	579	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,855 bps, Translation length: 622 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSMUST00000229494.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000229494.2 Zfp251-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000229494.2 Zfp251-202

Summary

About Us

Get help

Our sister sites

Follow us