Transcript: ENSMUST00000228802.2 Vmn1r216-203

Description

vomeronasal 1 receptor 216 [Source:MGI Symbol;Acc:MGI:2159696]

Gene Synonyms

V1ri10

Location

About this transcript

This transcript has 3 exons, is annotated with 1 domain and feature, is associated with 884 variant alleles and maps to 111 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000228389.2	Vmn1r216-202	10213	298aa	ENSMUSP00000153724.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26331	Q8R257	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000228802.2	Vmn1r216-203	7448	298aa	ENSMUSP00000153991.2	Nonsense mediated decay	CCDS26331	Q8R257	-
ENSMUST00000227317.2	Vmn1r216-201	8838	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 7,448 bps, Translation length: 298 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS26331

Version

ENSMUST00000228802.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

RNA-Seq supported only