Transcript: ENSMUST00000228529.2 Ogdhl-203

Description

oxoglutarate dehydrogenase-like [Source:MGI Symbol;Acc:MGI:3616088]

Location

Chromosome 14: 32,043,976-32,070,108 forward strand.

About this transcript

This transcript has 24 exons, is annotated with 18 domains and features, is associated with 1948 variant alleles and maps to 209 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000021913.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000022480.8	Ogdhl-201	3449	1029aa	ENSMUSP00000022480.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36866	E9Q7L0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000228529.2	Ogdhl-203	3723	1010aa	ENSMUSP00000154185.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B2RXT3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000228286.2	Ogdhl-202	744	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Summary

Statistics

Exons: 24, Coding exons: 22, Transcript length: 3,723 bps, Translation length: 1,010 residues

Version

ENSMUST00000228529.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000228529.2 Ogdhl-203

Summary

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Transcript: ENSMUST00000228529.2 Ogdhl-203

Summary

About Us

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