Transcript: ENSMUST00000228082.2 Bora-205

Description

bora, aurora kinase A activator [Source:MGI Symbol;Acc:MGI:1924994]

Gene Synonyms

6720463M24Rik

Location

Chromosome 14: 99,283,890-99,284,770 forward strand.

About this transcript

This transcript has 1 exon, is associated with 664 variant alleles and maps to 95 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022070.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000022656.8	Bora-201	2726	525aa	ENSMUSP00000022656.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27309	Q8BS90	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000227744.2	Bora-204	3834	273aa	ENSMUSP00000154660.2	Nonsense mediated decay		Q8BS90-2	-
ENSMUST00000227128.2	Bora-203	704	115aa	ENSMUSP00000154817.2	Nonsense mediated decay		A0A2I3BS24	-
ENSMUST00000226823.2	Bora-202	1071	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000228082.2	Bora-205	881	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 881 bps,

Version

ENSMUST00000228082.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000228082.2 Bora-205

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000228082.2 Bora-205

Summary

About Us

Get help

Our sister sites

Follow us