Transcript: ENSMUST00000227323.2 Slc25a32-203

Description

solute carrier family 25, member 32 [Source:MGI Symbol;Acc:MGI:1917156]

Gene Synonyms

2610043O12Rik, Mftc

Location

Chromosome 15: 38,959,464-38,976,068 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 1474 variant alleles and maps to 165 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022299.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000022908.10	Slc25a32-201	5905	316aa	ENSMUSP00000022908.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27443	Q8BMG8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000227323.2	Slc25a32-203	979	269aa	ENSMUSP00000154227.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q3T9D8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000228160.2	Slc25a32-204	1837	123aa	ENSMUSP00000154220.2	Nonsense mediated decay		A0A2I3BQL2	-
ENSMUST00000226144.2	Slc25a32-202	653	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 979 bps, Translation length: 269 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSMUST00000227323.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000227323.2 Slc25a32-203

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Transcript: ENSMUST00000227323.2 Slc25a32-203

Summary

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