Transcript: ENSMUST00000226459.2 Dnajc15-202

Description

DnaJ heat shock protein family (Hsp40) member C15 [Source:MGI Symbol;Acc:MGI:1913398]

Gene Synonyms

1110003P16Rik, Dnajd1

Location

Chromosome 14: 78,058,121-78,112,366 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 2848 variant alleles and maps to 320 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022013.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000226459.2	Dnajc15-202	6193	149aa	ENSMUSP00000154390.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27292	Q78YY6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000022590.5	Dnajc15-201	674	44aa	ENSMUSP00000022590.5	Nonsense mediated decay		A0A2K6EDK0	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000227249.2	Dnajc15-203	419	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 6,193 bps, Translation length: 149 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q78YY6

CCDS

This transcript is a member of the Mouse CCDS set: CCDS27292

Version

ENSMUST00000226459.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000226459.2 Dnajc15-202

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Transcript: ENSMUST00000226459.2 Dnajc15-202

Summary

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