Transcript: ENSMUST00000225720.2 Mat1a-203

Description

methionine adenosyltransferase I, alpha [Source:MGI Symbol;Acc:MGI:88017]

Gene Synonyms

AdoMet, Ams, MAT, MATA1, SAMS, SAMS1

Location

Chromosome 14: 40,826,992-40,846,369 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 17 domains and features, is associated with 1149 variant alleles and maps to 211 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000037798.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000225720.2	Mat1a-203	3468	396aa	ENSMUSP00000153488.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26959	Q91X83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000047286.7	Mat1a-201	3208	396aa	ENSMUSP00000044288.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26959	Q91X83	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000224514.2	Mat1a-202	747	186aa	ENSMUSP00000152905.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YCQ9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 3,468 bps, Translation length: 396 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q91X83

CCDS

This transcript is a member of the Mouse CCDS set: CCDS26959

Version

ENSMUST00000225720.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000225720.2 Mat1a-203

Summary

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Transcript: ENSMUST00000225720.2 Mat1a-203

Summary

About Us

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