Transcript: ENSMUST00000225425.2 Or4f4b-203

Description

olfactory receptor family 4 subfamily F member 4B [Source:MGI Symbol;Acc:MGI:3031123]

Gene Synonyms

GA_x6K02T2Q125-72534883-72535821, MOR245-6, Olfr1289

Location

Chromosome 2: 111,313,694-111,314,708 forward strand.

About this transcript

This transcript has 1 exon, is associated with 521 variant alleles and maps to 111 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000061195.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000120021.5	Or4f4b-201	1643	326aa	ENSMUSP00000146801.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A288CFY5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000207494.3	Or4f4b-202	1014	298aa	ENSMUSP00000147119.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS16527	Q8VF49	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000225425.2	Or4f4b-203	1015	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 1,015 bps,

Version

ENSMUST00000225425.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000225425.2 Or4f4b-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000225425.2 Or4f4b-203

Summary

About Us

Get help

Our sister sites

Follow us