Transcript: ENSMUST00000225344.2 Parp8-205

Description

poly (ADP-ribose) polymerase family, member 8 [Source:MGI Symbol;Acc:MGI:1098713]

Gene Synonyms

2810430O08Rik, D13Ertd275e

Location

Chromosome 13: 117,029,550-117,162,056 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 1 domain and feature, is associated with 9268 variant alleles and maps to 53 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000021725.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000022239.8	Parp8-201	3098	891aa	ENSMUSP00000022239.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36790	F8WIK2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000223949.2	Parp8-203	2965	852aa	ENSMUSP00000152911.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q3UD82	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000226107.2	Parp8-207	2728	253aa	ENSMUSP00000153188.2	Nonsense mediated decay		A0A286YDC6	-
ENSMUST00000225344.2	Parp8-205	636	108aa	ENSMUSP00000153307.2	Nonsense mediated decay		A0A286YD73	-
ENSMUST00000225974.2	Parp8-206	631	97aa	ENSMUSP00000153169.2	Nonsense mediated decay		A0A286YCW0	-
ENSMUST00000223833.2	Parp8-202	3436	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000224157.2	Parp8-204	2671	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 8, Coding exons: 5, Transcript length: 636 bps, Translation length: 108 residues

Version

ENSMUST00000225344.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000225344.2 Parp8-205

Summary

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Transcript: ENSMUST00000225344.2 Parp8-205

Summary

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