Transcript: ENSMUST00000224713.2 Gm21188-202

Description

predicted gene, 21188 [Source:MGI Symbol;Acc:MGI:5434543]

Location

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 1241 variant alleles and maps to 22 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000224713.2	Gm21188-202	1669	190aa	ENSMUSP00000153701.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS79248	Q3T9V6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000225638.2	Gm21188-203	2518	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000224147.2	Gm21188-201	1761	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 6, Coding exons: 1, Transcript length: 1,669 bps, Translation length: 190 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS79248

Version

ENSMUST00000224713.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.